Table of Contents

HK J Paediatr (New Series)
Vol 24. No. 1, 2019

HK J Paediatr (New Series) 2019;24:43-47

Case Report

The First Case of Cobalamin F Disorder in China: Report and Literature Review

F Tong, RL Yang, R Chen, ZY Zhao


Abstract

Objectives: To investigate the phenotype, genotype and prognosis of cblF disorder (CblF). Methodology: Data including newborn screening and clinical features, LMBRD1 mutations, treatment and prognosis of the first CblF case in China and 17 reported CblF cases were collected and analysed. Results: This case was picked up by newborn screening (NBS) due to elevated blood propionylcarnitine (C3) (5.50 μmol/L), propionylcarnitine / acetylcarnitine (C3/C2) ratio (0.47), propionylcarnitine / free carnitine C3/C0 ratio (0.25) and decreased methionine (Met) (5.27 μmol/L) identified by tandem mass spectrometry (MS-MS), then decreased serum Vitamin B12 (cobalamin; Vit B12) (116 pmol/L), elevated homocysteine (tHCY) (82.9 μmol/L), macrocytic anaemia and atrial septal defect, and patent ductus arteriosus were confirmed. This is similar to what has been reported in the literature. Besides, two novel truncated LMBRD1 mutations of p.R277* and p.C29* were confirmed. The data of all the 18 cases show that the common clinical features are macrocytic anaemia, failure to thrive, developmental delay, congenital heart disease, and small for gestational age. Similar biochemical characters were identified in all 3 cases from NBS, and a total of 35 LMBRD1 mutations in 10 different sites including frame-shift mutations (30/35), splice site mutations (2/35), nonsense mutations (2/35), and large fragment deletions (1/35) were observed, among which c.1056delG mutation was reported the most frequently (24/35). After Vit B12 injection and supportive treatment, all of the biochemical abnormalities and most of the clinical presentations have been significantly improved within 3 months in all cases. Conclusion: The biochemical characters of CblF are similar to the combined methylmalonic acid (MMA), except for decreased serum Vit B12, which should be distinguished from Vit B12 deficiency. Typical phenotype includes macrocytic anaemia, growth and development problems, and congenital malformations, all of which are nonspecific. The c.1056delG mutation is the common mutation. The concentrations of C3, C3/C2, C3/C0 and Met by MS-MS and the target genetic panel of MMA should be chosen for suspected MMA cases. CblF is a treatable disease, and injection of Vit B12 is effective, but the appropriate dosage remains unclear.

Keyword : Cobalamin; Genotype; Phenotype; Prognosis; Treatment


Abstract in Chinese

Introduction

Methylmalonic acid (MMA) is a heterogeneous disease caused by different genes of complementation groups including cblA-G, cblJ, cblX, and mut, which is divided as isolated MMA (cblA, cblB, cblD, mut) and combined MMA with hyperhomocysteinaemia (cblC, cblD, cblF, cblJ).

First reported by Rosenblatt in 1985, CblF (OMIM 277380) is an autosomal recessive disorder, and the LMBRD1 has been identified as the cause of the disease. The number of people suffering from CblF is scarce, to the best of our knowledge, there are only 17 reported patients worldwide and no reported case from Chinese population so far.

We summarised all information of the first CblF case in China and other 17 cases publishedn journals that can be obtained reviewed the phenotype, genotype, treatment and prognosis.

Case Report

The patient was a girl born at 41 weeks of gestation with a birth weight of 3.6 kg. She is the first child of her parents, from a non-consanguinity Han Chinese family without genetic disease history. newborn screening (NBS) by MS-MS was undertaken on Day 3 after her birth. Her abnormal metabolic profile included elevated blood C3 (5.50 μmol/L), C3/C2 ratio (0.47), C3/C0 ratio (0.25) and decreased Met (5.27 μmol/L). Besides, decreased serum Vit B12, elevated tHCY, and macrocytic anaemia were identified (Table 1). At the same time, serum folic acid, blood ammonia, blood lactate, fasting blood glucose and liver/kidney function were tested and proven to be normal. Her mother's serum levels of Vit B12 were normal, and atrial septal defect (ASD), patent ductus arteriosus (PDA) were confirmed by cardiac ultrasonography.

Thus, the infant was highly suspected to be Vit B12 deficiency or MMA. Daily intramuscular injection of 1 mg of cyanocobalamin (CNCbl), oral 100 mg/kg levocarnitine, and 250 mg/kg betaine was performed, then C3 and tHCY values were rapidly dropped within the normal reference interval after 5 days of medication (Table 1). Hence, the levocarnitine and betaine were terminated.

Molecular testing was performed after informed consent from the parents was gained on Day 15 after birth. Genetic panel of MMA (including cblA, cblB, cblC, cblD, cblE, cblF, cblG, cblJ, and mut), were tested by next generation sequencing (Beijing Gold Gene Technology Co., Ltd, Beijing, China), and compound heterozygous novel mutations of LMBRD1 were found in the infant. Sanger sequencing confirmed these two nonsense mutations, i.e. a heterozygous c.829C> T from her mother and a heterozygous c.87C> A from her father (Figure 1). There was no report about c.87C> A and c.829C> T mutations in the ExAC database, both of which result in truncated LMBD1 proteins. SIFT, LRT and MutationTaster softwares demonstrated that the both mutations were located in the conserved region of LMBD1 protein, and it is presumed that they have a great, destructive effect on the structure and function of LMBD1 protein. As a result, the infant was diagnosed as CblF finally.

Subsequently, the medication was adjusted to 1 mg of hydroxocobalamin (OHCbl) through intramuscular injection twice a week. Ten days later, anaemia parameters were significantly improved and recovered on the 75-day-old infant after continuing treatment with OHCbl (Table 1). The case has been followed up for 23 months until now, all biochemical measurements and mile-stone are normal. The results of cardiac ultrasonography indicated that both the ASD and PDA recovered, and the assessment of Bayley Scales of Infant Development was normal when the patient was 8 months old.

Table 1 All measurements of the Chinese case
Age Measurements Patient values Reference interval
3d (NBS) C3 5.50 μmol/L 0.43-3.8 μmol/L
C3/C2 0.47 0.03-0.27
C3/C0 0.25 0.02-0.15
Met 5.27 μmol/L 7.18-41.35 μmol/L
15d C3 4.66 μmol/L 0.43-3.8 μmol/L
C3/C2 1.42 0.03-0.27
C3/C0 0.34 0.02-0.15
Met 5.33 μmol/L 7.18-41.35 μmol/L
Vit B12 116 pmol/L 156-672 pmol/L
tHCY 82.9 μmol/L 5.0-15.0 μmol/L
Hb 87 g/L 110-155 g/L
MCV 102.5fL 75.0-92.0 fL
MCH 34.6 pg 26.0-31.0 pg
MCHC 337 g/L 315-365 g/L
20d C3 1.35 μmol/L 0.43-3.8 μmol/L
C3/C2 0.04 0.03-0.27
C3/C0 0.02 0.02-0.15
Met 19.25 μmol/L 7.18-41.35 μmol/L
Vit B12 1867 pmol/L 156-672 pmol/L
tHCY 8.3 μmol/L 5.0-15.0 μmol/L
45d Hb 94 g/L 110-155 g/L
MCV 97 fL 75.0-92.0 fL
MCH 30.7 pg 26.0-31.0 pg
MCHC 317 g/L 315-365 g/L
75d C3 1.12 μmol/L 0.43-3.8 μmol/L
C3/C2 0.02 0.03-0.27
C3/C0 0.02 0.02-0.15
Met 24 μmol/L 7.18-41.35 μmol/L
Vit B12 924 pmol/L 156-672 pmol/L
tHCY 5.6 μmol/L 5.0-15.0 μmol/L
Hb 109 g/L 110-155 g/L
MCV 83 fL 75.0-92.0 fL
MCH 26.7 pg 26.0-31.0 pg
MCHC 322 g/L 315-365 g/L
Hb: haemoglobin; MCV: mean corpuscular volume; MCH: mean corpuscular haemoglobin; MCHC: mean corpuscular haemoglobin concentration

Figure 1 Mutations of LMBRD1 gene of the infant and parents. Red circle represents the mutation loci. Figure 1a shows the mutation c.87C>A of the infant, Figure 1b shows the mutation c.87C>A of the father, Figure 1c shows the mutation c.829C>T of the infant, and Figure 1d shows the mutation c.829C>T of the mother. Sanger sequencing results demonstrated that both mutations c.87C>A and C.829C>T of the infant were inherited from the father and the mother, respectively.

Literature Review

A keyword-based retrieval of "LMBRD1" and "cblF" was performed in PubMed (http://www.ncbi.nlm.nih.gov/pubmed), Ovid (http://ovidsp.ovid.com/autologin.cgi), Medline (http://apps.webofknowledge.com/
MEDLINE_GeneralSearch_input.do?product=MEDLINE&search_mode
), Wanfang Data (http://g.Wanfangdata.com.cn), Weibu periodicals (http://lib.cqvip.com), and China National Knowledge Infrastructure (http://epub.cnki.net/KNS/brief/result.aspx?dbprefix=CJFQ). A total of 18 cases with cblF disorder were selected in our study, among which, 17 cases came from the research previously reported.

All clinical presentations were displayed in Table 2. A total of 35 LMBRD1 mutations in 10 different sites were found (Table 3).

All cases have received continuing injection of Vit B12 (OHCbl or CNCbl), with or without levocarniting, betaine, and other supportive treatment. The dosage of Vit B12 ranged from 1 mg per day to 1 mg every 2 months. All of the abnormal biochemical changes and most of the clinical features have been significantly improved after medication, except for congenital malformations.

Among all cases, three were picked from NBS and treated with early Vit B12 injection, their C3 (5.73-15 μmol/L) and tHCY(39-82.9 μmol/L) were increased, and their serum Vit B12 (62-148 pmol/L) was decreased before treatment. A total of 6 LMBRD1 mutations were detected in these infants, including c.1339-G>T (2/6), c.1056delG, c.246+3476G>T, c.829C>T, and c.87C>A.

Table 2 Summary of the clinical presentations in all cases
Clinical presentations Patients number
Haematological features 9/18
Developmental delay 8/18
Failure to thrive 8/18
Congenital heart disease 8/18
Small for gestational age 7/18
Stomatitis +/- glossitis 5/18
Feeding difficulties 4/18
Gastric upset 3/18
Dental anomalies 3/18
Microcephaly 3/18
Facial dysmorphism 2/18
Hepatic involvement 2/18
Rash 2/18
Seizures 2/18
Hypotonia 2/18
Torticollis 1/18
Pesequinovarus 1/18
Tracheoesophageal fistula 1/18
Arthritis 1/18
Recurrent infection 1/18
Recurrent apnoea 1/18
Encephalopathy 1/18
Cleft palate 1/18
Unilateral renal agenesis 1/18

Table 3 Summary of the mutations of all cases
Patient Mutation 1 Mutation 2
  Nucleotide change Amino acid change Nucleotide change Amino acid change
1 (This study) c.829C>T p.R277* c.87C>A p.C29*
21 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
33 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
44 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
54 c.848_851delAGAG p.E283Gfs*3 c.1056delG p.N353Ifs*18
65 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
76 c.515-516delAC p.T172Rfs*10 c.515-516delAC p.T172Rfs*10
86 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
96 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
106 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
116 c.1056delG p.N353Ifs*18 ? ?
127 c.1405delG p.D469Mfs*38 c.1405delG p.D469Mfs*38
138 c.246+3476G>T / c.1056delG p.N353Ifs*18
148 c.916-1G>T / c.1056delG p.N353Ifs*18
158 c.1339-1G>T / c.1056delG p.N353Ifs*18
166 c.404delC p.T135Ifs*15 c.1056delG p.N353Ifs*18
179 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
1810 c.1056delG p.N353Ifs*18 c.1056delG p.N353Ifs*18
https://www.ncbi.nlm.nih.gov/nuccore/NM_018368.3

Discussion

CblF disturbs lysosomal release of cobalamin into the cytoplasm, causing cobalamin unavailable for the synthesis of adenosylcobalamin (AdoCbl) and methylcobalamin (MeCbl), and leading to combined MMA. This typical biochemistry was confirmed by our study. In addition, we discovered another interesting biochemical feature, decreased serum Vit B12 concentration, which could be easily misdiagnosed as Vit B12 deficiency. These two diseases should be carefully identified due to different treatment regimens: the former requires life-long treatment, while nutritional Vit B12 deficiency could terminate Vit B12 after serum Vit B12 level returns to normal.

There are considerable wide clinical spectrum in CblF, whose common clinical features include macrocytic anaemia, failure to thrive and developmental delay, and congenital heart disease (CHD) and small for gestational age (SGA), all of which are nonspecific. Compared with type cblC, CHD and SGA are two more frequent-occurring diseases in CblF. Hence MS-MS and genetic testing are recommended for patients with unexplained macrocytic anaemia, growth and development delay, repeated infection, and feeding difficulty.

LMBRD1, which is located in the chromosome 6q12-13, contains 16 exons, and encoding LMBRD1 membrane protein consisting of 9 transmembrane domain sites. In our study, the frameshift mutation is the most frequent type, accounting for 85.7% of the total LMBRD1 mutations, and c.1056delG mutation is the most common type, with a frequency of 68.6%. Up to now, there is no report related to missense mutation, indicating that the missense mutation may be neglected due to its slight effect on the structure and function of LMBD1 protein. Compound heterozygous

novel mutations of c.87C>A and c.829C>T were detected in the Chinese case, it expands the genotype spectrum of CblF. In addition, digenic mutations have been reported for cobalamin deficiency in one study,2 which showed that the affected patient was identified that he carried mutations of LMBRD1 and MTR by exome sequencing. This study highlighted that the mutations in CblF may be more complicated, and different pathogenic genes may be involved in it. Due to the similar biochemistry among different types of combined MMA and Vit B12 deficiency and complicated genotype of MMA, genetic panel including cblC, cblD, cblF, and cblJ is recommended instead of single gene sequence for timely and accurate diagnosis.

The genotype-phenotype correlations of CblF are not clear so far due to limited cases.

According to the data, all abnormal biochemical changes and most of clinical presentations in these cases have been significantly improved after Vit B12 treatment, proving that Vit B12 injection is an effective treatment for CblF. The dosage of Vit B12 ranged from 1mg per day to 1 mg every 2 months, and the appropriate dosage remains to be explored.

Acknowledgement

This work was supported by Fund (2017YFC1001704 / 2017YFC1001703) from the Science and Technology Department of China.

Conflict of Interest

The authors declare that they have no competing interest.


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